Marine_Scotland_FishDAC_12377
eng
dataset
Marine Directorate
Scottish Government
+44 (0)300 244 4000
marine.gis@gov.scot
pointOfContact
2024-02-15
UK GEMINI
2.2
urn:ogc:def:crs:EPSG::4326
OGP
Species Distribution - A verified distribution model for the lesser sandeel (Ammodytes marinus)
2021-06-10
publication
Marine_Scotland_FishDAC_12377
The lesser sandeel Ammodytes marinus is a key component of the North East Atlantic ecosystem but little is known about its distribution outside of fished areas. In this study, species distribution models were developed to predict the occurrence and density of sandeels in parts of the North Sea and Celtic Seas regions. A hurdle model was found to be the best fitting model with the highest predictive performance; model evaluation with independent data demonstrated that it had significant discrimination ability across the study region. The distribution model helps refine past inferences about sandeel availability to predators and indicates to marine planners potential areas where anthropogenic impacts should be considered
SDM Metadata sandeel: An excel file containing detailed metadata relating to the development of the species distribution model using the checklist based on that published in Feng et al. (2019) A checklist for maximising reproducibility of ecological niche models. Nature ecology & evolution.
Four geotiffs:
CelticSeas_ProbPres - probability of presence of buried sandeel in the Celtic Seas study region.
CelticSeas_PredictedDensity - predicted density of buried sandeel in the Celtic Seas study region (number per m^2).
NorthSea_ProbPres - probability of presence of buried sandeel in the North Sea study region.
NorthSea_PredictedDensity - predicted density of buried sandeel in the North Sea study region (number per m^2).
Marine Directorate
Scottish Government
+44 (0)300 244 4000
Mailpoint 11, Area 1B South, Victoria Quay
Edinburgh
EH6 6QQ
United Kingdom
marine.gis@gov.scot
pointOfContact
Marine Directorate
Scottish Government
+44 (0)300 244 4000
Mailpoint 11, Area 1B South, Victoria Quay
Edinburgh
EH6 6QQ
United Kingdom
marine.gis@gov.scot
custodian
Marine Directorate
Scottish Government
+44 (0)300 244 4000
Mailpoint 11, Area 1B South, Victoria Quay
Edinburgh
EH6 6QQ
United Kingdom
marine.gis@gov.scot
distributor
Marine Directorate
Scottish Government
+44 (0)300 244 4000
Mailpoint 11, Area 1B South, Victoria Quay
Edinburgh
EH6 6QQ
United Kingdom
marine.gis@gov.scot
originator
unknown
Marine Environmental Data and Information Network
Fish taxonomy-related abundance per unit area of the bed
Habitat extent
SeaDataNet Parameter Discovery Vocabulary
2018-12-12
revision
Species distribution
theme
GEMET - INSPIRE themes, version 1.0
2008-06-01
publication
geonetwork.thesaurus.external.theme.httpinspireeceuropaeutheme-theme
Biological diversity maintained
Marine food webs are at normal abundance and diversity
Marine Strategy Framework Directive descriptors
2017-02-25
revision
This project was supported by the EU's INTERREG VA Programme, managed by the Special EU Programmes Body (SEUPB). The views and opinions expressed in this study do not necessarily reflect those of the European Commission of the SEUPB.
The following attribution statement must be used: Contains information from the Scottish Government licensed under the Open Government Licence v3.0.
If you use this data, please cite Langton, R., Boulcott, P. and Wright P.J. (2021) A verified distribution model for the lesser sandeel Ammodytes marinus. Marine Ecology Progress Series. https://doi.org/10.3354/meps13693
otherRestrictions
no limitations to public access
200
eng
biota
environment
-9.953613
3.405762
52.12
61.19621
SeaDataNet vertical extent keywords
2010-01-01
revision
The water column that is significantly influenced by the seabed, which is broader in deep ocean than in shelf seas. Guideline approximation is bottom 10m of oceans and bottom 5% of shelf (<200m) seas.
2020-04-01
2021-06-10
Langton, Boulcott & Wright (2021) A verified distribution model for the lesser sandeel Ammodytes marinus. Marine Ecology Progress Series. https://doi.org/10.3354/meps13693
https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/ows?token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&service=wms&version=1.3.0&request=GetCapabilities
OGC:WMS-1.3.0-http-get-capabilities
download
https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/ows?token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&service=wcs&version=1.1.0&request=getCapabilities
OGC:WCS
download
https://marinescotland.atkinsgeospatial.com/nmpi/default.aspx?layers=1897
WWW:LINK-1.0-http--link
View "Lesser Sandeel (Ammodytes marinus) - Celtic Seas - Predicted density of buried sandeels (number per m^2)" on Marine Scotland Maps
download
https://marinescotland.atkinsgeospatial.com/nmpi/default.aspx?layers=1898
WWW:LINK-1.0-http--link
View "Lesser Sandeel (Ammodytes marinus) – North Sea - Predicted density of buried sandeels (number per m^2)" on Marine Scotland Maps
download
https://marinescotland.atkinsgeospatial.com/nmpi/default.aspx?layers=1899
WWW:LINK-1.0-http--link
View "Lesser Sandeel (Ammodytes marinus) – North Sea - Probability of presence of buried sandeel" on Marine Scotland Maps
download
https://marinescotland.atkinsgeospatial.com/nmpi/default.aspx?layers=1900
WWW:LINK-1.0-http--link
View "Lesser Sandeel (Ammodytes marinus) – Celtic Seas - Probability of presence of buried sandeel" on Marine Scotland Maps
download
https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/wcs?service=WCS&version=2.0.0&token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&request=GetCoverage&coverageID=nmpwfs:species_distribution_lesser_sandeels_celtic_seas_predicted_density&crs=EPSG:4326&format=image/tiff
WWW:DOWNLOAD-1.0-http--download
species_distribution_lesser_sandeels_celtic_seas_predicted_density
Download "Lesser Sandeel (Ammodytes marinus) - Celtic Seas - Predicted density of buried sandeels (number per m^2)" as geotiff on WGS84 datum
https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/wcs?service=WCS&version=2.0.0&token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&request=GetCoverage&coverageID=nmpwfs:species_distribution_lesser_sandeels_celtic_seas_probability_presence&crs=EPSG:4326&format=image/tiff
WWW:DOWNLOAD-1.0-http--download
species_distribution_lesser_sandeels_celtic_seas_probability_presence
Download "Lesser Sandeel (Ammodytes marinus) – Celtic Seas - Probability of presence of buried sandeel" as geotiff on WSG84 datum
https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/wcs?service=WCS&version=2.0.0&token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&request=GetCoverage&coverageID=nmpwfs:species_distribution_lesser_sandeels_north_sea_predicted_density&crs=EPSG:4326&format=image/tiff
WWW:DOWNLOAD-1.0-http--download
species_distribution_lesser_sandeels_north_sea_predicted_density
Download "Lesser Sandeel (Ammodytes marinus) – North Sea - Predicted density of buried sandeels (number per m^2)" as geotiff on WGS84 datum
https://msmap1.atkinsgeospatial.com/geoserver/nmpwfs/wcs?service=WCS&version=2.0.0&token=d46ffd2a-e192-4e51-8a6a-b3292c20f1ee&request=GetCoverage&coverageID=nmpwfs:species_distribution_lesser_sandeels_north_sea_probability_presence&crs=EPSG:4326&format=image/tiff
WWW:DOWNLOAD-1.0-http--download
species_distribution_lesser_sandeels_north_sea_probability_presence
Download "Lesser Sandeel (Ammodytes marinus) – North Sea - Probability of presence of buried sandeel" as geotiff on WGS84 datum
GIS - - zip folder, GIS - - species_distribution_lesser_sandeels_north_sea_probability_presence
dataset
Source of occurrence data: Holland et al. (2005). Identifying sandeel Ammodytes marinus sediment habitat preferences in the marine environment. MEPS. 303: 269-282. Obtained by personal communication.
Sources of environmental data:
Emodnet Bathymetry Portal - (https://portal.emodnet-bathymetry.eu/#) Grids D3 and D4 downloaded on 10th Jan 2019.
Depth and slope were extracted from Emodnet Bathymetry data using terrain function in the Raster package in R.
Sediment point data from BGS (http://www.bgs.ac.uk/GeoIndex/offshore.htm) were downloaded in January 2019
INFOMAR sediment data downloaded June 2019
Marine recorder version Feb 2019 was downloaded April 2019
Layers of percentage sand, mud and gravel were interpolated from the point records by inverse distance weighting.
The analysis was done using a Hurdle model fitted with the countreg package. All analyses were undertaken in R version 3.6.2.